Insertion junction: CLIP2.051627_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051627
Chromosome:chromosome 8
Location:4168536
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383650 NUP85 Nucleoporin 85; (1 of 1) K14304 - nuclear pore complex protein Nup85 (NUP85) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCTTCACATGACACCTGGTGGCTTTCAACCGCTTTAACCCAACTTTC
Internal bar code:CTAACGGTGCGATCATGAATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1234
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTCAGACAAGCCACACGA
Suggested primer 2:CTGGAGCTCATCGCAGCATA