Insertion junction: CLIP2.051632_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051632
Chromosome:chromosome 14
Location:459259
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g610801 CDS
lncRNA_TCONS_00189579 CDS
lncRNA_TCONS_00189580 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTCATTCCGGAGCGCCGCTTCATTGAGTGGCTCGCACGCAAGACGCAG
Internal bar code:TTAGTCATTGCGGGTAGTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:284
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGATACACAGCAGCATG
Suggested primer 2:AACTACAAAGCGGACGACGT