Insertion junction: CLIP2.051638_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051638
Chromosome:chromosome 17
Location:5936135
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g742050 (1 of 18) IPR011051 - RmlC-like cupin domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAGTGCAAGCCCAAAGCGCCCACACGCTTCCTAGTCCTTGTGACGCAC
Internal bar code:AAGTTTGTACAAATGGGGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1516
LEAP-Seq percent confirming:4.81928
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:79
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAGGGAGGGAGGGAAAT
Suggested primer 2:GACCTGACTGCTGCATTCCT