Insertion junction: CLIP2.051641_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051641
Chromosome:chromosome 7
Location:4882309
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346400 FKM6 DNA methylase in the FkbM family; (1 of 3) K05302 - SET domain-containing protein 6 (SETD6) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCTGGGCTCGGCGCGGTGGTGGTCCTGTGGGGCAGGAGGAGAGGCCG
Internal bar code:CTTAGCCGTCCAAAGGGGAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:429
LEAP-Seq percent confirming:69.0476
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCAACACACACACACACA
Suggested primer 2:GACAGCTGCAGTTGTTGTGG