Insertion junction: CLIP2.051650_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051650
Chromosome:chromosome 17
Location:527855
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699400 (1 of 6) PTHR10994//PTHR10994:SF72 - RETICULON // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACATCGTTCCCCACCGCCAGCGTGTTGAGAATGTACTTGGCCTTGGCGA
Internal bar code:AGGAGTGTTACATTTATCTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1708
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACAGGCAGTCAAGGCAG
Suggested primer 2:CGGCTTATCAGGTAGGGCAG