Insertion junction: CLIP2.051664_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051664
Chromosome:chromosome 13
Location:73409
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562300 HON2 Histone H1; (1 of 3) K11275 - histone H1/5 (H1_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCTGCTGCCACTGGACATGCTGTACCCCTCACCTAGACAGCGGCCCC
Internal bar code:TCTAGAGACTACGTCGCGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2974
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGACTCTCGTATTCCTGC
Suggested primer 2:CAGGACAAAGTTGTTGCGGG