Insertion junction: CLIP2.051666_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051666
Chromosome:chromosome 4
Location:3017969
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225050 (1 of 3) PF16166 - Chloroplast import apparatus Tic20-like (TIC20) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGTTGCAGCAGACTTGGCTGAAGAGGGCTGGGAGGGGGGAGGCGTGCG
Internal bar code:GTGCCGCAACTTATCTATTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2828
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAAGCTTCGCGTTGTGTG
Suggested primer 2:GGGGGAAATGGGTGTGTAGG