Insertion junction: CLIP2.051681_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.051681
Chromosome:chromosome 12
Location:5441492
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g529600 RPA1 DNA-directed RNA polymerase I subunit 1; (1 of 1) K02999 - DNA-directed RNA polymerase I subunit RPA1 (RPA1, POLR1A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGACAGCGACGACACCGAGCCCAAGCCCGACAGCAGCAGCAAGGCCGCC
Internal bar code:TCTGTTAGGTAAATCAGTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:637
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTGCGATATGGATGCAT
Suggested primer 2:GTCATGTACAAGCTGCTGCG