Insertion junction: CLIP2.051685_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051685
Chromosome:chromosome 6
Location:1541938
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g260950 (1 of 1) K12483 - EH domain-containing protein 1 (EHD1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGCGCCAGCCGCACCTCACTGCTCGCGCTCTCCCACCACCCCAGCAC
Internal bar code:GCGTCCGGGTATCACATGAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:380
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACTCACGCTCTTGAACT
Suggested primer 2:GGGAAGCGCACACAACATTT