Insertion junction: CLIP2.051708_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.051708
Chromosome:chromosome 2
Location:6815326
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388171 (1 of 2) PTHR12905//PTHR12905:SF0 - SPERM PROTEIN HOMOLOG // METALLOPHOSPHOESTERASE DOMAIN-CONTAINING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCTCGTGCCGCCACTGACCTAGCACTCCTGCACACTGCATCCCACCC
Internal bar code:GAAATGGGGAACGGTAATTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:370
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCGTAAGGGCATGATGC
Suggested primer 2:CGAATAGTTGAAGTGCCGCG