Insertion junction: CLIP2.051711_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051711
Chromosome:chromosome 15
Location:232145
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801680 (1 of 39) PTHR13078//PTHR13078:SF53 - FAMILY NOT NAMED // PROTEIN MAOC-1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGACCGAATAGCGCATACGTGCGATACGGCCTCCGAGGTCGCAAGGTC
Internal bar code:AGATAGCATGGGCCCTGGCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3353
LEAP-Seq percent confirming:62.1622
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGGCTGTGCAATCTTCG
Suggested primer 2:GCTAGGAATGGGTGCTGGTT