Insertion junction: CLIP2.051715_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051715
Chromosome:chromosome 1
Location:4226935
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g028550 OTU1 (1 of 1) PTHR12419:SF10 - PROTEIN OTUB-3, ISOFORM B; OTU-like cysteine protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGGTAGGTACGCCGCCAGCCCTACCGCCGTGCCCTAACGCCCCACCT
Internal bar code:TCGACATATTAAGCCTCGCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2385
LEAP-Seq percent confirming:87.8788
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTTGCCAAAAGGGTTTA
Suggested primer 2:CTTTCCTCTTTCCCCCACCC