Insertion junction: CLIP2.051715_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051715
Chromosome:chromosome 1
Location:4226938
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g028550 OTU1 (1 of 1) PTHR12419:SF10 - PROTEIN OTUB-3, ISOFORM B; OTU-like cysteine protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGAAGGCGTCGCCAGCGCCTCGGCACGCCGCGTGCATAAGGCCTCATC
Internal bar code:AATTAGATGCTCATGGTCGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2117
LEAP-Seq percent confirming:45.1613
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTCCTCTTTCCCCCACCC
Suggested primer 2:GCGCTTGCCAAAAGGGTTTA