Insertion junction: CLIP2.051716_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051716
Chromosome:chromosome 3
Location:5690995
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186750 (1 of 7) IPR011989//IPR016024 - Armadillo-like helical // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGTACCAGGTTGGTCTGGGCTGCAGGTCTGAGGGAAGTGGAGTGGGGA
Internal bar code:GTCCGCGGATTTTATAGGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:602
LEAP-Seq percent confirming:41.6667
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGGGTGGATGGCAAATA
Suggested primer 2:CGTCGTGGGTGAGTTGTGTA