Insertion junction: CLIP2.051722_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051722
Chromosome:chromosome 11
Location:3305146
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g476500 PAO7 Pheophorbide a oxygenase-related protein; (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAGTGCCCGCACCGCCGCGCACCGCTGAGCCGCGGCCGCTTGTACCGG
Internal bar code:ATGAAGCTTGTGGGGCTAGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1706
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCAGGGTGAAGCATCTGC
Suggested primer 2:CATGGCTGAATTGGGCGATG