Insertion junction: CLIP2.051728_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051728
Chromosome:chromosome 9
Location:2665577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392000 (1 of 3) PF09763 - Exocyst complex component Sec3 (Sec3_C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTTATCCCCTGCTGTGTCGGGCGTGCCTAGGGGTGAGCGTGTGGAACG
Internal bar code:GTCGTACTTGCGCTAGGTAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:124
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTAGCCGTATTTGGAGG
Suggested primer 2:GTGTGTGTATGACCCCCTGG