Insertion junction: CLIP2.051730_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.051730
Chromosome:chromosome 14
Location:2556472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g624900 FAP171 Flagellar Associated Protein 171; (1 of 5) IPR000104//IPR016024 - Antifreeze protein, type I // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTTGGATGCGTTTTGTGACTGCTTACAATTGGTATCGAGACCGAATAG
Internal bar code:TCGAGAGAATAGCCGTCGAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1432
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGACTCACTGTCCGCAC
Suggested primer 2:GCAAGCCGCGTAATTCTCAG