Insertion junction: CLIP2.051733_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051733
Chromosome:chromosome 1
Location:5229187
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036600 EXN3 (1 of 2) K14570 - RNA exonuclease 1 (REX1, REXO1, RNH70); Exoribonuclease II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCGCAGTAGGCGCGCACTCTGAGACACCCACACTGCGCCCGCACTAA
Internal bar code:GCTCCCATACCATGACTTCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:55
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGGACAAGGACCTCGCTG
Suggested primer 2:TCCGGCCTAAGAAGCAAAGG