Insertion junction: CLIP2.051743_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051743
Chromosome:chromosome 16
Location:6259862
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676350 (1 of 1) PTHR23073//PTHR23073:SF37 - 26S PROTEASE REGULATORY SUBUNIT // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAATCCACTGTTGCCAACGGTCACCGTTACCGCGATTATAACTGGAAC
Internal bar code:ATTTGTTGACATGCAAGGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:500
LEAP-Seq percent confirming:36.5079
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCACCGTTCCCAGTAAGC
Suggested primer 2:GTGTGTGTGTGTGTGCGTAC