Insertion junction: CLIP2.051745_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.051745
Chromosome:chromosome 1
Location:5222686
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036550 ERV14 (1 of 1) PTHR12290:SF11 - PROTEIN CORNICHON; Cornichon-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGGAGGGTGCGCCCATGCACGAGCCGCTCGCCAGATCGCACGTGTGCA
Internal bar code:TTGCCCCTACCATTGGACCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:282
LEAP-Seq percent confirming:7.14286
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TAGAATGGCAGGAGGGCTCT
Suggested primer 2:GCCCCGTGTAATCCCTTTCA