Insertion junction: CLIP2.051745_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051745
Chromosome:chromosome 3
Location:4101063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172350 (1 of 1) PF14736 - Protein N-terminal asparagine amidohydrolase (N_Asn_amidohyd) 5'UTR
Cre03.g172400 (1 of 100) IPR001810 - F-box domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATACAGTGTCGGGCCCCCTCGCATGGCGTTTGACCCTGGTGTGATGCAA
Internal bar code:GCAAATATTAGGGTATCTTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:4781
LEAP-Seq percent confirming:91.8367
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGAGAGCGAGGGGATTCA
Suggested primer 2:CGCTTCCCGTACGAGCTTAT