Insertion junction: CLIP2.051749_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.051749
Chromosome:chromosome 1
Location:566781
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003475 (1 of 2) 3.4.24.35 - Gelatinase B / Type V collagenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGGCCGCGCACCGTCACCGGCGGCGCGCCGTACTCCGAGGTGGTGGA
Internal bar code:AGGACCAGGTGCTAGTCGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:305
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGACGAGCAATGCATGTCTG
Suggested primer 2:TGACTGGGAGCATGTGTTCC