Insertion junction: CLIP2.051756_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051756
Chromosome:plastome
Location:193462
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802334 orf528 unknown ORF CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTACTTTTCCAATACAAGAAAACAACTTGATGGAAGAAGCGCAATTTG
Internal bar code:GACTGTAGTCTTCTGATATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:126
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGTTAAGCTCGAACCCC
Suggested primer 2:TCCTCTTTGGGGTTGCACAG