Insertion junction: CLIP2.051765_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.051765
Chromosome:chromosome 12
Location:7521958
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g556600 GAP4,GAPN1 (1 of 1) 1.2.1.9 - Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) / Triosephosphate dehydrogenase; Glyceraldehyde 3-phosphate dehydrogenase, nonphosphorylating 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCAGGCTGGCCAACCAGCCGAGGCGAGGGGAACTTGAGGGGCCAGGTG
Internal bar code:GCGTTCTTGGTTATGTACCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:618
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAGATGGAGGTGGAGGT
Suggested primer 2:GATTCGGAGGCGACATAGCA