Insertion junction: CLIP2.051768_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051768
Chromosome:chromosome 12
Location:8461100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549850 (1 of 1) PF09445 - RNA cap guanine-N2 methyltransferase (Methyltransf_15) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCACCTACCTCCCCCGGTCTGCAACACCCCTCCACCAGGCACAACGCG
Internal bar code:GTGCTGTCTCATAACATTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1456
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCCCGACCACTAGCTAC
Suggested primer 2:CACAACACAACACGGACGAC