Insertion junction: CLIP2.051774_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051774
Chromosome:chromosome 16
Location:1202302
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650650 AGT3 Alanine-glyoxylate aminotransferase; (1 of 1) 4.2.3.2 - Ethanolamine-phosphate phospho-lyase / O-phosphorylethanol-amine phospho-lyase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACCCAACCACCCAACCGCCACACCCCCTATTGCATTGGGTTCGGGTT
Internal bar code:CGCTGTAATGTTTGAACGAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:100
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTACCTAGTCCCACTGCCCT
Suggested primer 2:TGAGGAGTAGGTGGGTAGCC