Insertion junction: CLIP2.051777_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051777
Chromosome:chromosome 3
Location:8537680
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g211409 PPR15,mS106,MRPS106 Mitochondrial ribosomal protein S106, Chlamydomonas specific intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGTAACGGCTGCGCCCCGCACCTGTGCAAGCTCGTCTCTCCGCTGCA
Internal bar code:TTGTAACAATTATATAGGCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5537
LEAP-Seq percent confirming:93.2203
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTGTGTAAGCCGTGTGT
Suggested primer 2:CCACCACCATATTGGCCACT