Insertion junction: CLIP2.051781_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.051781
Chromosome:chromosome 2
Location:447529
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g076050 (1 of 2) IPR000008//IPR000104 - C2 domain // Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGAGCTGCACCTCGCGCAGTCGTTGGGTGTCTCAACTTTGGTGCTGTG
Internal bar code:CACGTCCTCTAAGGCTCTGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:198
LEAP-Seq percent confirming:5.26316
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACCCGAGTTGTTGTCGA
Suggested primer 2:CATGCTGTATGCGGACAACG