Insertion junction: CLIP2.051789_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051789
Chromosome:chromosome 17
Location:2700766
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g717200 (1 of 1) PTHR10060:SF24 - DEOXYRIBONUCLEASE TATDN3-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGAATCCCTTCCCGTAATCGCGGGCAAGTTGCCACACGCACACGTACA
Internal bar code:CCGGTGGGGGACAGCTGCGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1044
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCACGCAGTTTCTCTGAC
Suggested primer 2:CCCGAGTACTCCGTATGTGC