Insertion junction: CLIP2.051793_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051793
Chromosome:chromosome 7
Location:1766448
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325721 (1 of 1) PTHR34776:SF1 - F17F16.3 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAACTCTCCAGCCTCCACTGGCCTCATGCAGCCATGCCGCACATACTT
Internal bar code:GCGGACATCCGCCATGAATCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1104
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGAAGGCAAGGAAGAGGG
Suggested primer 2:TGACGACAGCTTGACATGCT