Insertion junction: CLIP2.051808_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051808
Chromosome:chromosome 6
Location:6371799
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293250 (1 of 2) K18272 - protein XRP2 (RP2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCCTCCGCGTAAGCCGGAGGCGGCGGCGCAGCCACCGCCACCGCCGC
Internal bar code:ATTTGTACCGATGGATCAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:757
LEAP-Seq percent confirming:58.3333
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGAGGAGAGGGTTAGCCA
Suggested primer 2:ATAAGGTTGAGGGTGCGTGG