Insertion junction: CLIP2.051811_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051811
Chromosome:chromosome 1
Location:4352556
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g029550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACTGAATAGCCCCACACTGAAGCAGCACCCCAAGGTCGCAGGGAAAGG
Internal bar code:CACATAGCGGGCATAAAGTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3416
LEAP-Seq percent confirming:70.8333
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGCATGTTTGGGGGATA
Suggested primer 2:CCCCCATGTTGGTGACGTAA