Insertion junction: CLIP2.051816_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051816
Chromosome:chromosome 3
Location:5546879
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185200 CPL3,MPA6 (1 of 3) PTHR11668//PTHR11668:SF267 - SERINE/THREONINE PROTEIN PHOSPHATASE // SUBFAMILY NOT NAMED; protein ser/thr phosphatase 3'UTR
Cre03.g800347 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTCTGTTGCCGCTCTGGGGTATGCATGGTCTGTTGCTCTCTGTTTCAA
Internal bar code:TTTTACGAGTCTGTCCTTGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:242
LEAP-Seq percent confirming:23.0769
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCTTAGCGCTAGCCCTC
Suggested primer 2:TTACGAGGTTTTGTCGCGGA