Insertion junction: CLIP2.051828_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051828
Chromosome:chromosome 8
Location:3038166
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g375200 (1 of 1) K07870 - Ras homolog gene family, member T1 (RHOT1, ARHT1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGTTCGGTAAGTAAGGGTATGGTAGGCGTTAGGCAATCCCGTTGGTG
Internal bar code:AGGCGATTGATTCAACTCGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:278
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTGTTCGACCAGGACAAG
Suggested primer 2:CCAAAGGCAAGAGCACACAC