Insertion junction: CLIP2.051830_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051830
Chromosome:chromosome 3
Location:8982527
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800413 (1 of 1) PTHR10445 - GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGACCAGATGAAGCGGCCGCGGCTGGAGCGCGAGGAGCTGGAGGAGAT
Internal bar code:TTATTGGCGATGTTGTGCGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:113
LEAP-Seq percent confirming:7.31707
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGTGTGAGGTTGTGGGG
Suggested primer 2:GCAACGTCAACCCAACATCC