Insertion junction: CLIP2.051832_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051832
Chromosome:chromosome 2
Location:3702566
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g100450 CYG20 (1 of 5) IPR000104//IPR001054//IPR029787 - Antifreeze protein, type I // Adenylyl cyclase class-3/4/guanylyl cyclase // Nucleotide cyclase; Adenylate/guanylate cyclase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGTGAGCGGCATGCCTCCCAACACGTGTGTGAACGGCGACACCTCTAC
Internal bar code:CAGCGGCATATTTAGTTATAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1136
LEAP-Seq percent confirming:64.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATGACGTCGCCTTGTAC
Suggested primer 2:GACCTGATGCCAGCGATACA