Insertion junction: CLIP2.051839_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051839
Chromosome:chromosome 17
Location:2830100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718468 (1 of 40) 3.4.24.38 - Gametolysin / Lysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCACGGCGGACACCTGGACTTCACCCTTCCTGGCGGTTACCAACGGT
Internal bar code:TCGCCACCTCCGCCTACAGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1021
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTCACCCGTATGCCGTCTAG
Suggested primer 2:ACGTACATGCTTGCTGGTGA