Insertion junction: CLIP2.051855_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051855
Chromosome:chromosome 6
Location:5900536
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g289750 CYCD2 D-type cyclin; (1 of 3) K06627 - cyclin A (CCNA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGCCTCATCTTTGCGCCTGGGCTTCTCCCGTTGTCACGCGGTCCCTT
Internal bar code:AATTTTCAAGGCTGCAGGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3958
LEAP-Seq percent confirming:98.7952
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAAGCGTTTGAAAGGGCG
Suggested primer 2:TTGCCCTTCACAGTCCACTC