Insertion junction: CLIP2.051856_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051856
Chromosome:chromosome 2
Location:6396689
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388150 MRPL36,bL36m Mitochondrial ribosomal protein L36; (1 of 1) PTHR18804:SF13 - 39S RIBOSOMAL PROTEIN L36, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCGCGGGACCTGTTTGCAGGGGGCTCCTCGGGAGCCGGCACACGTCA
Internal bar code:ACGGGTGAAAGCCGCGGCTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2350
LEAP-Seq percent confirming:87.037
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAGTACACGCGATGGATG
Suggested primer 2:CAGGGTGAGTGGAAGCAGAG