Insertion junction: CLIP2.051857_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.051857
Chromosome:chromosome 16
Location:2017626
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656800 (1 of 2) PTHR12210//PTHR12210:SF70 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // AT02326P-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCCCAGAGTGAGCGGTTGGTGCCGGTGACACCATCATATCGTACAGAA
Internal bar code:ATGTGTCGTTCATATTGAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:929
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAGCGGTGAAGACCTTCG
Suggested primer 2:CGTCTCGTAGTCCACATCCG