Insertion junction: CLIP2.051862_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051862
Chromosome:chromosome 6
Location:5079897
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g282450 PFH18,PHX11 (1 of 1) PTHR10869//PTHR10869:SF91 - PROLYL 4-HYDROXYLASE ALPHA SUBUNIT // SUBFAMILY NOT NAMED; Putative prolyl 4-hydroxylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCATGGCGTGGCGTGGTGTGGTGTGGTGCGGTGTGGTGTAGGTGCAG
Internal bar code:CCGATTCGTCGAAGTAGTACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1129
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTAACGCTGGTGGAGAC
Suggested primer 2:CATCAAGCTGCGCCTCAATC