Insertion junction: CLIP2.051879_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051879
Chromosome:chromosome 4
Location:3090008
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225500 CSA6 (1 of 1) PF15066 - Cancer-associated gene protein 1 family (CAGE1); conserved protein of unknown function intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGACCACCCCACCCACCCGCCAAGCAACCTACACTGCCGACCCTGTTAT
Internal bar code:TTTTACGGCGGTTGTCGTAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2654
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACTTCGAGCAGCACCAC
Suggested primer 2:CAACACAAAGCCCAAGTCCG