Insertion junction: CLIP2.051892_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051892
Chromosome:chromosome 8
Location:3170631
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre33.g758997 (1 of 1) PTHR22993//PTHR22993:SF18 - FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAAGAAGGAGGTTCAACGCGGGCGGGTTTGGCGTGGGGCCGGGCGGGG
Internal bar code:TGGCCTCAGCTGTGGTCCCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:301
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTCTACCGACACCCAAC
Suggested primer 2:GTCGTTGTCAAAGGTCGTGC