Insertion junction: CLIP2.051900_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.051900
Chromosome:chromosome 3
Location:2583716
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160150 (1 of 35) IPR016135 - Ubiquitin-conjugating enzyme/RWD-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGCGGGACTGCTGAATTGATGTACTGCGTGCTTACCATTGCTACATGT
Internal bar code:ATGCACTAAAACGGATCCACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1154
LEAP-Seq percent confirming:73.6842
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AACTTGCACCTGGAGCTACC
Suggested primer 2:GTTCTGACGATGCATGACGC