Insertion junction: CLIP2.051903_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051903
Chromosome:chromosome 12
Location:6619726
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538900 (1 of 25) PTHR10516 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGAATCAGGATCCGGAGGCGGCACTGGAGCGGTACGCGCAAGCGATGT
Internal bar code:TTATTCCTGTACAATTTTCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2505
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGAGCATACCCTTGCCAC
Suggested primer 2:CTTCCAGGAGCTGATAGGCG