Insertion junction: CLIP2.051905_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051905
Chromosome:chromosome 16
Location:2853418
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g662951 (1 of 1) PF06985//PF12796//PF13637 - Heterokaryon incompatibility protein (HET) (HET) // Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGAGCTGGCGCTGGGGCATGCCCAAGCCCACCGTGTACCGGCCCGGC
Internal bar code:GTGACTCAATATTGGCGGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1220
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AATCATGGGGGAGGCAAGTG
Suggested primer 2:AAATCAGGCTGAGGACGGTG