Insertion junction: CLIP2.051913_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051913
Chromosome:chromosome 8
Location:2027551
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g368750 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCTTCATCCCCTCCACATGCTCATCATGCCTCACACTGTGTCTTAGCT
Internal bar code:ACTACAAGTCTTTGCGGAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2090
LEAP-Seq percent confirming:80.6452
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGACTGCAAAAGTGGCC
Suggested primer 2:GCTATGGCGCTAATGGAGGT