Insertion junction: CLIP2.051924_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051924
Chromosome:chromosome 9
Location:2617922
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGGGCCCATGGAAGCTCTCCAGACCTAGCCGATCAGCCCATTGTCAT
Internal bar code:CAGGGCCTTGAACGGTTGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:178
LEAP-Seq percent confirming:46.1538
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCAGCCATGCTAGTTTGA
Suggested primer 2:AACCCCCGCTACTCTAACCT