Insertion junction: CLIP2.051929_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051929
Chromosome:chromosome 7
Location:2620122
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g330300 (1 of 2) K14411 - RNA-binding protein Musashi (MSI) CDS
lncRNA_TCONS_00074821 CDS
lncRNA_TCONS_00075115 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAGCAGTGCCCCGGGACCAAATGCCGCCAACTCCACGGATGCAGGGCA
Internal bar code:TGATGTGTAGTCTTAGAAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4655
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTTGGCGAAATTGGCAG
Suggested primer 2:CTCAGAACGCCCAGTGAGTT