Insertion junction: CLIP2.051937_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051937
Chromosome:chromosome 13
Location:3643061
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588100 CYN19C,ROC2,CYN5,CYN19-3 (1 of 1) K09565 - peptidyl-prolyl isomerase F (cyclophilin D) (PPIF); Cyclophilin 19-3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAATCCAAAACAATGGAGCGGGTGCTGTGTGTAACTTCCTTGTAAGGT
Internal bar code:GGTTGGGAATCAGACCTGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3355
LEAP-Seq percent confirming:83.0189
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGAGTTCGGGGGAATATG
Suggested primer 2:TAGGTCCCTCTACCCAACGG